ISO-1 [Ligand Id: 9984] activity data from GtoPdb and ChEMBL

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ChEMBL ligand: CHEMBL210858
  • histone deacetylase 6/Histone deacetylase 6 in Human [ChEMBL: CHEMBL1865] [GtoPdb: 2618] [UniProtKB: Q9UBN7]
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  • Macrophage migration inhibitory factor in Human [ChEMBL: CHEMBL2085] [UniProtKB: P14174]
  • Macrophage migration inhibitory factor in Mouse [ChEMBL: CHEMBL1926491] [UniProtKB: P34884]
  • Macrophage migration inhibitory factor in Rat [ChEMBL: CHEMBL4524037] [UniProtKB: P30904]
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  • sigma non-opioid intracellular receptor 1/Sigma non-opioid intracellular receptor 1 in Rat [ChEMBL: CHEMBL3602] [GtoPdb: 2552] [UniProtKB: Q9R0C9]
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DB Assay description Assay Type Standard value Standard parameter Original value Original units Original parameter Reference
histone deacetylase 6/Histone deacetylase 6 in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL1865] [GtoPdb: 2618] [UniProtKB: Q9UBN7]
ChEMBL Determination of IC50 values for inhibition of enzymatic assay of human HDAC6 with custom peptide substrate B 6.01 pIC50 985.7 nM IC50 HDAC6 screening dataset using tau-based substrate in an enzymatic assay yields selective inhibitors and activators
Macrophage migration inhibitory factor in Human (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL2085] [UniProtKB: P14174]
ChEMBL Displacement of 4'-(7-Hydroxy-2-oxo-2H-chromen-3-yl)-[1,1'-biphenyl]-4-carboxylic acid from C-terminal His-tagged recombinant human MIF expressed in Escherichia coli BL21 (DE3) preincubated for 10 mins followed by probe addition and measured after 10 mins by fluorescence assay B 4.33 pKd 47000 nM Kd J Med Chem (2020) 63: 11920-11933 [PMID:32940040]
ChEMBL Inhibition of C-terminal His-tagged recombinant human MIF expressed in Escherichia coli BL21 (DE3) using 4-HPP as substrate preincubated for 10 mins followed by substrate addition by UV absorption spectrum analysis B 4.36 pKi 44000 nM Ki J Med Chem (2020) 63: 11920-11933 [PMID:32940040]
ChEMBL Inhibition of C-terminal His-tagged recombinant human MIF tautomerase activity expressed in Escherichia coli BL21 using 4-hydroxyphenyl pyruvic acid as substrate preincubated for 15 mins followed by substrate addition and measured for 10 mins in presence of 0.5 mM EDTA by UV absorbance based Cheng-Prusoff equation analysis B 4.36 pKi 44000 nM Ki Eur J Med Chem (2020) 186: 111849-111849 [PMID:31767137]
ChEMBL Inhibition of MIF tautomerase (unknown origin) using 4-HPP as substrate preincubated for 1 hr followed by substrate addition by Lineweaver-Burk plot anlysis B 4.36 pKi 43500 nM Ki Bioorg Med Chem Lett (2022) 55: 128445-128445 [PMID:34758374]
ChEMBL Inhibition of Tautomerase Activity of Human MIF: Inhibition of the tautomerase activity of MIF was measured using 4-hydroxyphenyl pyruvic acid (HPP) as substrate, largely following previously reported protocols (Taylor et al., Biochemistry, 1999, 38, 7444-7452). HPP was dissolved in 0.5 M acetate buffer, pH 6.0 to a final concentration of 10 mM and incubated overnight at room temperature to allow equilibration of the keto and enol forms. MIF (6 μL) was premixed in 500 mM boric acid, pH 6.2 (142 μL) and transferred to a transparent U bottom 96-well plate to a final concentration of 50 nM MIF. At this concentration high signal-to-noise and linearity were observed after analysis of progress curves for enol production at different protein concentrations. Inhibitors were dissolved in DMSO to 10 mM and an initial screen was performed. For compounds that showed ca. 25% or greater inhibition at 10 μM, an inhibition constant, was measured.Compounds were placed into wells (2 μL) at 6 different concentrations and incubated for 30 minutes until the assay was started by addition of HPP (504) at two concentrations (1.0 and 2.5 mM). The negative control was MIF incubated with DMSO vehicle, which in all assays was 1% and did not influence tautomerase activity. MIF activity was monitored at 305 nm for formation of the borate-enol complex using an Infinite F500 plate reader (TECAN, Morrisville, N.C.) for 175 seconds. Calculation of initial velocities and the nonlinear regression analyses for the enzyme kinetics were repeated three times with the program Prism6 (GraphPad, La Jolla, Calif.).Data obtained for the Example compounds, obtained using the methods described in Example B, are provided in Table 3. Results are also included for a reference compound ISO-1 (Chang, K. F.; Al-Abed, Y. Bioorg. Med. Chem. Lett. 2006, 16, 3376-3379; Balachandran, S. et al. Bioorg. Med. Chem. Lett. 2009, 19, 4773-4776). X-ray crystal structures were obtained for complexes of 3a, 3b, and 3v (Examples 1, 2, and 21) with human MIF as described below in Example C, which confirm the binding of these inhibitors in the tautomerase active site. B 4.68 pKi 21000 nM Ki US-10336721-B2. Biaryltriazole inhibitors of macrophage migration inhibitory factor (2019)
ChEMBL Inhibition Assay: Data obtained for the Example compounds, obtained using the methods described in Example B. B 4.68 pKi 21000 nM Ki US-10968198-B2. Biaryltriazole inhibitors of macrophage migration inhibitory factor (2021)
ChEMBL Inhibition of dopachrome tautomerase activity of human recombinant MIF B 4 pIC50 >100000 nM IC50 Bioorg Med Chem Lett (2009) 19: 4773-4776 [PMID:19592246]
ChEMBL Inhibition of [3H]-BTZO-1 binding to recombinant human C-terminal His-tagged MIF expressed in Escherichia coli BL21 (DE3) measured after 3 hrs by SPA B 4 pIC50 >100000 nM IC50 Chem Biol (2010) 17: 1282-1294 [PMID:21168764]
ChEMBL Inhibition of recombinant His-tagged MIF tautomerase activity (unknown origin) using 4-HPP as substrate B 4.1 pIC50 79000 nM IC50 Bioorg Med Chem (2018) 26: 999-1005 [PMID:29428527]
ChEMBL Inhibition of dopachrome tautomerase activity of MIF in human THP1 cells B 4.16 pIC50 69000 nM IC50 Bioorg Med Chem Lett (2009) 19: 4773-4776 [PMID:19592246]
ChEMBL Inhibition of MIF tautomerase (unknown origin) using 4-HPP as substrate preincubated for 1 hr followed by substrate addition B 4.19 pIC50 65300 nM IC50 Bioorg Med Chem Lett (2022) 55: 128445-128445 [PMID:34758374]
ChEMBL Inhibition of C-terminal His-tagged recombinant human MIF tautomerase activity expressed in Escherichia coli BL21 using 4-hydroxyphenyl pyruvic acid as substrate preincubated for 15 mins followed by substrate addition and measured for 10 mins in presence of 0.5 mM EDTA by UV absorbance analysis B 4.19 pIC50 64000 nM IC50 Eur J Med Chem (2020) 186: 111849-111849 [PMID:31767137]
ChEMBL Inhibition of spontaneous secretion/release/recognition of MIF from freshly isolated human PBMC by ELISA B 4.6 pIC50 25000 nM IC50 Bioorg Med Chem Lett (2009) 19: 4773-4776 [PMID:19592246]
ChEMBL Inhibition of recombinant human MIF (Pro2 to Ala115 residues) expressed in Escherichia coli using dopachrome methyl ester as substrate preincubated with protein followed by substrate addition B 4.74 pIC50 18200 nM IC50 J Med Chem (2018) 61: 8104-8119 [PMID:29812929]
ChEMBL Inhibition of MIF tautomerase activity B 4.96 pIC50 11000 nM IC50 Bioorg Med Chem Lett (2006) 16: 3376-3379 [PMID:16682188]
ChEMBL Inhibition of recombinant MIF (unknown origin) tautomerase activity using dopachrome methyl ester as substrate measured for 2 to 20 secs by spectrophotometric analysis B 5.15 pIC50 7000 nM IC50 J Med Chem (2018) 61: 8104-8119 [PMID:29812929]
Macrophage migration inhibitory factor in Mouse (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL1926491] [UniProtKB: P34884]
ChEMBL Enzyme Assay: MIF tautomerase activity was measured by UV-Visible recording spectrophotometry (SHIMADZU, UV1600U). A fresh stock solution of L-dopachrome methyl ester was prepared at 2.4 mM through oxidation of L-3,4-dihydroxyphenylalanine methyl ester with sodium periodate. 1 μL of MIF solution (800-900 ng/mL) and 1 μL of a DMSO solution with various concentrations of the enzymatic inhibitor were added into a plastic cuvette (10 mm, 1.5 mL) containing 0.7 mL assay buffer (50 mM potassium phosphate, pH 7.2). Then L-dopachrome methyl ester solution (0.3 mL) was added to the assay buffer mixture. Activity was determined at room temperature and the spectrometric measurements were made at λ=475 nm for 20 seconds by monitoring the rate of decolorization of L-dopachrome methyl ester in comparison to a standard solution. B 4.96 pIC50 11000 nM IC50 US-8618147-B2. Modified macrophage migration inhibitory factor inhibitors (2013)
Macrophage migration inhibitory factor in Rat (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL4524037] [UniProtKB: P30904]
ChEMBL Inhibition of recombinant rat MIF expressed in Escherichia coli BL21 (DE3) assessed as reduction in tautomerase activity using L-dopachrome carboxy-methyl ester as substrate by spectrophotometry B 4.17 pIC50 68000 nM IC50 Chem Biol (2010) 17: 1282-1294 [PMID:21168764]
sigma non-opioid intracellular receptor 1/Sigma non-opioid intracellular receptor 1 in Rat (target type: SINGLE PROTEIN) [ChEMBL: CHEMBL3602] [GtoPdb: 2552] [UniProtKB: Q9R0C9]
ChEMBL Displacement of [3H]-(+)-pentazocine from sigma 1 receptor in rat brain by competition binding assay B 6.99 pKi 102.3 nM Ki Medchemcomm (2015) 6: 1093-1103

ChEMBL data shown on this page come from version 36:

Zdrazil B, Felix E, Hunter F, Manners EJ, Blackshaw J, Corbett S, de Veij M, Ioannidis H, Lopez DM, Mosquera JF, Magarinos MP, Bosc N, Arcila R, Kizilören T, Gaulton A, Bento AP, Adasme MF, Monecke P, Landrum GA, Leach AR. (2024). The ChEMBL Database in 2023: a drug discovery platform spanning multiple bioactivity data types and time periods. Nucleic Acids Res., 52(D1). DOI: 10.1093/nar/gkad1004. [EPMCID:10767899] [PMID:37933841]
Davies M, Nowotka M, Papadatos G, Dedman N, Gaulton A, Atkinson F, Bellis L, Overington JP. (2015) 'ChEMBL web services: streamlining access to drug discovery data and utilities.' Nucleic Acids Res., 43(W1). DOI: 10.1093/nar/gkv352. [EPMCID:25883136]