digoxin   Click here for help

GtoPdb Ligand ID: 4726

Synonyms: Lanoxin®
Approved drug PDB Ligand
digoxin is an approved drug (FDA (no history prior to 1975))
Compound class: Natural product
Comment: Digoxin is a cardiac glycoside similar to digitoxin.
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2D Structure
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Physico-chemical Properties
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Hydrogen bond acceptors 14
Hydrogen bond donors 6
Rotatable bonds 7
Topological polar surface area 203.06
Molecular weight 780.43
XLogP 2.17
No. Lipinski's rules broken 2

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)

SMILES / InChI / InChIKey
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Canonical SMILES O=C1OCC(=C1)C1CCC2(C1(C)C(O)CC1C2CCC2C1(C)CCC(C2)OC1CC(O)C(C(O1)C)OC1CC(O)C(C(O1)C)OC1CC(O)C(C(O1)C)O)O
Isomeric SMILES O=C1OCC(=C1)[C@H]1CC[C@]2([C@]1(C)[C@H](O)C[C@H]1[C@H]2CC[C@H]2[C@]1(C)CC[C@@H](C2)O[C@H]1C[C@H](O)[C@@H]([C@H](O1)C)O[C@H]1C[C@H](O)[C@@H]([C@H](O1)C)O[C@H]1C[C@H](O)[C@@H]([C@H](O1)C)O)O
InChI InChI=1S/C41H64O14/c1-19-36(47)28(42)15-34(50-19)54-38-21(3)52-35(17-30(38)44)55-37-20(2)51-33(16-29(37)43)53-24-8-10-39(4)23(13-24)6-7-26-27(39)14-31(45)40(5)25(9-11-41(26,40)48)22-12-32(46)49-18-22/h12,19-21,23-31,33-38,42-45,47-48H,6-11,13-18H2,1-5H3/t19-,20-,21-,23-,24+,25-,26-,27+,28+,29+,30+,31-,33+,34+,35+,36-,37-,38-,39+,40+,41+/m1/s1
InChI Key LTMHDMANZUZIPE-PUGKRICDSA-N

Generated using the Chemistry Development Kit (CDK) (Willighagen EL et al. Journal of Cheminformatics vol. 9:33. 2017, doi:10.1186/s13321-017-0220-4; https://cdk.github.io/)

Classification Click here for help
Compound class Natural product
Approved drug? Yes (FDA (no history prior to 1975))
Approved drug? Yes. FDA (1975)
WHO Essential Medicine WHO Essential Medicines List (EML) (23rd List, 2023). Access PDF version.
Click to view more information about the WHO Model Lists of Essential Medicines.
IUPAC Name Click here for help
4-[(1S,2S,5S,7R,10R,11S,14R,15S,16R)-5-{[(2R,4S,5S,6R)-5-{[(2S,4S,5S,6R)-5-{[(2S,4S,5S,6R)-4,5-dihydroxy-6-methyloxan-2-yl]oxy}-4-hydroxy-6-methyloxan-2-yl]oxy}-4-hydroxy-6-methyloxan-2-yl]oxy}-11,16-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]-2,5-dihydrofuran-2-one
International Nonproprietary Names Click here for help
INN number INN
389 digoxin
Synonyms Click here for help
Lanoxin®
Database Links Click here for help
Specialist databases
Reactome Drug Reactome logo R-ALL-9684074
Reactome Reaction Reactome logo R-HSA-9684068
Other databases
CAS Registry No. 20830-75-5 (source: Scifinder)
ChEBI CHEBI:4551
ChEMBL Ligand CHEMBL1751
DrugBank Ligand DB00390
DrugCentral Ligand 882
GtoPdb PubChem SID 178101437
LIPID MAPS LMST01120023
PubChem CID 2724385
RCSB PDB Ligand DGX
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UniChem Compound Search for chemical match using the InChIKey LTMHDMANZUZIPE-PUGKRICDSA-N
UniChem Connectivity Search for chemical match using the InChIKey LTMHDMANZUZIPE-PUGKRICDSA-N
Wikipedia Digoxin