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CoV Membrane glycoprotein

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Target not currently curated in GtoImmuPdb

Target id: 3117

Nomenclature: CoV Membrane glycoprotein

Family: Coronavirus (CoV) proteins

Gene and Protein Information Click here for help
Species TM AA Chromosomal Location Gene Symbol Gene Name Reference
SARS-CoV-2 3 222 Orf5 M Membrane glycoprotein
SARS-CoV 3 221 Orf5 M Membrane glycoprotein
Previous and Unofficial Names Click here for help
membrane protein
Database Links Click here for help
Entrez Gene
RefSeq Protein
UniProtKB
Selected 3D Structures Click here for help
Image of receptor 3D structure from RCSB PDB
Description:  SARS-CoV-2 M protein dimer (long form) in complex with YN7756_1 Fab
PDB Id:  7VGR
Resolution:  2.7Å
Species:  SARS-CoV-2
References:  2
Image of receptor 3D structure from RCSB PDB
Description:  SARS-CoV-2 M protein dimer (short form) in complex with YN7717_9 Fab
PDB Id:  7VGS
Resolution:  2.8Å
Species:  SARS-CoV-2
References:  2
General Comments
The membrane glycoprotein (M) is usually regarded as the most abundant protein in the coronavirus envelope. The SARS-CoV-2 M protein is 222 aa and by similarity with other coronavirus M proteins is predicted to act as a scaffold for the co-assembly of the complex of structural and accessory proteins that form the viral envelope [1]. The crystal structure of M shares unexpected similarities with that of the viral ion channel (viroporin) formed by ORF3a [2], but ion conductance has not been demonstrated, and is predicted to be unlikely for the M structures determined so far. Targeting M protein's function in viral assembly offers a potential mechanism for an antiviral therapeutic intervention.

References

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1. Ruch TR, Machamer CE. (2012) The coronavirus E protein: assembly and beyond. Viruses, 4 (3): 363-82. [PMID:22590676]

2. Zhang Z, Nomura N, Muramoto Y, Ekimoto T, Uemura T, Liu K, Yui M, Kono N, Aoki J, Ikeguchi M et al.. (2022) Structure of SARS-CoV-2 membrane protein essential for virus assembly. Nat Commun, 13 (1): 4399. [PMID:35931673]

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