65PF   Click here for help

GtoPdb Ligand ID: 11350

Compound class: Synthetic organic
Comment: 65PF is a small-molecule probe that can be used to explore the active site cavity of cytochrome P450 enzyme 1A1 [1].
Click here for help

Ligand Activity Visualisation Charts

These are box plot that provide a unique visualisation, summarising all the activity data for a ligand taken from ChEMBL and GtoPdb across multiple targets and species. Click on a plot to see the median, interquartile range, low and high data points. A value of zero indicates that no data are available. A separate chart is created for each target, and where possible the algorithm tries to merge ChEMBL and GtoPdb targets by matching them on name and UniProt accession, for each available species. However, please note that inconsistency in naming of targets may lead to data for the same target being reported across multiple charts.

✖

View interactive charts of activity data across species
2D Structure
Click here for help

2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

✖
Click here for structure editor
Physico-chemical Properties
Click here for help

Physico-chemical Properties

Calculated molecular properties are available for small molecules and natural products (not peptides). Properties were generated using the CDK toolkit. All properties were selected to enable the prediction of the Lipinski Rule-of-Five profile or ‘druglikeness’ for each ligand. For more info on each category see the help pages.

✖
Hydrogen bond acceptors 1
Hydrogen bond donors 0
Rotatable bonds 1
Topological polar surface area 35.53
Molecular weight 278.09
XLogP 3.45
No. Lipinski's rules broken 0
SMILES / InChI / InChIKey
Click here for help

SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

✖
Canonical SMILES O=C1CC(Oc2c1c1C=CCOc1cc2)c1ccccc1
Isomeric SMILES O=C1CC(Oc2c1c1C=CCOc1cc2)c1ccccc1
InChI InChI=1S/C18H14O3/c19-14-11-17(12-5-2-1-3-6-12)21-16-9-8-15-13(18(14)16)7-4-10-20-15/h1-9,17H,10-11H2
InChI Key XIKPIBLKOKRKJQ-UHFFFAOYSA-N

For advanced searching click here to open chemical structure editor

Similar Ligands Click here for help
flavanone
Click here for ligand page
Targets
A1 receptor; A3 receptor
sakuranetin
Click here for ligand page
Targets
TAS2R31; A1 receptor; A2A receptor; A3 receptor
(S)-liquiritigenin
Click here for ligand page
Targets
Estrogen receptor-β; TRPM3
6-methoxysakuranetin
Click here for ligand page
6E11
Click here for ligand page
Targets
receptor interacting serine/threonine kinase 1
naringenin
Click here for ligand page
Targets
TAS2R39; TRPM3
isosakuranetin
Click here for ligand page
Targets
TRPM3
hesperetin
Click here for ligand page
5H78PF
Click here for ligand page
Targets
CYP1A2
(+/-)-Eriodictyol
Click here for ligand page
Targets
TAS2R14
homoeriodictyol
Click here for ligand page
Targets
TAS2R14
6-prenylnaringenin
Click here for ligand page
Targets
Cav3.1