PIP2   Click here for help

GtoPdb Ligand ID: 2387

Synonyms: phosphatidylinositol-4,5-bisphosphate | PIP2
Compound class: Metabolite or derivative
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Ligand Activity Visualisation Charts

These are box plot that provide a unique visualisation, summarising all the activity data for a ligand taken from ChEMBL and GtoPdb across multiple targets and species. Click on a plot to see the median, interquartile range, low and high data points. A value of zero indicates that no data are available. A separate chart is created for each target, and where possible the algorithm tries to merge ChEMBL and GtoPdb targets by matching them on name and UniProt accession, for each available species. However, please note that inconsistency in naming of targets may lead to data for the same target being reported across multiple charts.

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View interactive charts of activity data across species
2D Structure
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2D Structure

An image of the ligand's 2D structure. For small molecules with SMILES these are drawn using the NCI/CADD Chemical Identifier Resolver. Click on the image to access the chemical structure search tool with the ligand pre-loaded in the structure editor. For other types of ligands, e.g. longer nucleotides and peptides, a manually drawn representation of the molecule may be provided.

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Physico-chemical Properties
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Physico-chemical Properties

Calculated molecular properties are available for small molecules and natural products (not peptides). Properties were generated using the CDK toolkit. All properties were selected to enable the prediction of the Lipinski Rule-of-Five profile or ‘druglikeness’ for each ligand. For more info on each category see the help pages.

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Hydrogen bond acceptors 19
Hydrogen bond donors 8
Rotatable bonds 44
Topological polar surface area 332
Molecular weight 1022.49
XLogP 9.87
No. Lipinski's rules broken 4
SMILES / InChI / InChIKey
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SMILES / InChI / InChIKey

SMILES (Simplified Molecular Input Line Entry Specification) A specification for unambiguously describing the structure of chemical molecules using short ASCII strings. Canonical SMILES specify a unique representation of the 2D structure without chiral or isotopic specifications. Isomeric SMILES include chiral specification and isotopes.

Standard InChI (IUPAC International Chemical Identifier) and InChIKey InChI is a non-proprietary, standard, textual identifier for chemical substances designed to facilitate linking of information and database searching. An InChIKey is a simplified version of a full InChI, designed for easier web searching.

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Canonical SMILES CCCCCCCCC=CCCCCCCCC(=O)OCC(OC(=O)CCCCCCCC=CCCCCCCCC)COP(=O)(OC1C(O)C(O)C(C(C1O)OP(=O)(O)O)OP(=O)(O)O)O
Isomeric SMILES CCCCCCCC/C=C\CCCCCCCC(=O)OC[C@@H](OC(=O)CCCCCCC/C=C\CCCCCCCC)COP(=O)(O[C@@H]1[C@H](O)[C@H](O)[C@H]([C@@H]([C@H]1O)OP(=O)(O)O)OP(=O)(O)O)O
InChI InChI=1S/C45H85O19P3/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-38(46)59-35-37(61-39(47)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2)36-60-67(57,58)64-43-40(48)41(49)44(62-65(51,52)53)45(42(43)50)63-66(54,55)56/h17-20,37,40-45,48-50H,3-16,21-36H2,1-2H3,(H,57,58)(H2,51,52,53)(H2,54,55,56)/b19-17-,20-18-/t37-,40-,41+,42+,43-,44-,45-/m1/s1
InChI Key IGQSAMXNWMLOOS-GGDMTQDZSA-N
Natural/Endogenous Targets
Target
PLD2
Selectivity at ion channels
Key to terms and symbols Click column headers to sort
Target Sp. Type Action Value Parameter Concentration range (M) Reference
Kir2.1 Ligand is endogenous in the given species Mm Activator Agonist - - 1x10-5 - 5x10-5 4,10,12
⤷ Conc range: 1x10-5 - 5x10-5 M [4,10,12]
Voltage: -30.0 mV
TRPM7 Ligand is endogenous in the given species Rn Activator Agonist - - 2x10-5 11
⤷ Conc range: 2x10-5 M [11]
Voltage: 60.0 mV
Kir3.1 Ligand is endogenous in the given species ? Activator Agonist 6.3 pKd 5x10-5 4
⤷ pKd 6.3 (Kd 5.01x10-7 M) Conc range: 5x10-5 M [4]
Voltage: Physiological
Kir3.2 Ligand is endogenous in the given species ? Activator Agonist 6.3 pKd 5x10-5 4
⤷ pKd 6.3 (Kd 5.01x10-7 M) Conc range: 5x10-5 M [4]
Voltage: Physiological
TRPM4 Ligand is endogenous in the given species Hs Activator Agonist 5.3 pEC50 - 8
⤷ pEC50 5.3 [8]
Voltage: 100.0 mV
TRPM4 Ligand is endogenous in the given species Mm Activator Agonist 5.2 pEC50 - 14
⤷ pEC50 5.2 [14]
Voltage: -80.0 mV
HCN2 Mm Activator - 5.0 pEC50 - 9
⤷ pEC50 5.0 (EC50 1.09x10-5 M) [9]
Voltage: -35.0 mV
Kv7.2 Ligand is endogenous in the given species Hs Activator - 3.7 pEC50 - 5
⤷ pEC50 3.7 [5]
Kv7.4 Ligand is endogenous in the given species Hs Activator - 3.7 pEC50 - 5
⤷ pEC50 3.7 [5]
Kir3.3 Ligand is endogenous in the given species Hs Activator - - - - 3
⤷ [3]
Kir3.4 Ligand is endogenous in the given species Hs Activator - - - - 1,3
⤷ [1,3]
TRPM2 Ligand is endogenous in the given species Hs Activator (membrane PIP2) Activation - - - 13
⤷ [13]
IP3R1 Hs Antagonist Antagonist - - -
⤷ μM range
Selectivity at enzymes
Key to terms and symbols Click column headers to sort
Target Sp. Type Action Value Parameter Concentration range (M) Reference
PLD2 Ligand is endogenous in the given species Hs Activator Activation - - - 6
⤷ [6]
Additional information and targets (data relate to human unless otherwise stated)
Description Data Reference
Endogenous activators at PLD1 ADP-ribosylation factor 1 (ARF1, P84077), PIP2, RhoA, PKC evoked phosphorylation, RalA 2,7
Ligand mentioned in the following text fields
Inositol polyphosphate phosphatases overview
Phosphoinositide-specific phospholipase C overview
Inositol polyphosphate phosphatases comments